Short description: Spaghetti is a new interactive tool for human brain tractography segmentation. It supports neuroanatomists and medical doctors in their study of white matter anatomical structures from diffusion magnetic resonance imaging (dMRI) data. Unlike previous systems for tractography segmentation, this is a computer-assisted tool in which the user interacts with a summary of the tractography instead of the whole set of streamlines. The summary is generated by clustering the tractography into a desired number of clusters, usually in the order of tens or one hundred.
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NeuroBox is a collection of several pieces of code acting as plugins of Owncloud software, in order to remotely manage scripts for data analysis, job instantiation and queue management on high performance computing services. It is written in PHP and it can be used as an OwnCloud "app", from OwnCloud web interface. NeuroBox plugin reads the content of synchronised directories and organize it in abstract elements called studies. Studies are shown within a web interface which acts like a graphical frontend to queuing systems for parallel computing.